| Ecosystem | Type | Status | Ref. |
|---|---|---|---|
| Bonaparte Coast | Sea/Bay/Gulf | native | 106854 |
| Central Indo-Pacific | sea/bay/gulf | native | 3099 |
| Exmouth to Broome | Sea/Bay/Gulf | native | 106854 |
| Indian Ocean | Sea/Bay/Gulf | native | 106854 |
| Java Transitional | sea/bay/gulf | native | 3099 |
| Pacific Ocean | Sea/Bay/Gulf | native | 80410 |
| Papua | Sea/Bay/Gulf | native | 3099 |
| South China Sea | Sea/Bay/Gulf | native | 80410 |
| Southern Java | Sea/Bay/Gulf | native | 3099 |
| Sunda Shelf | sea/bay/gulf | native | 80410 |
| Western Coral Triangle | sea/bay/gulf | native | 3099 |